Morph-M

h1. Morph-M Python - ImportExport to other python librairies

h2{color:#8B0000;background:#ddd}. Introduction

Sometimes, you need to convert an image created by morphee to the image format of other libraries. It's possible to make this conversion and then to transform them back to MorpheeImages.

h2{color:#8B0000;background:#ddd}. PIL(Python Image Library)

bq. *%{color:#006400}+Morph-M Gray images To PIL...+%*

<pre><code class="ruby">

im = mp.fileRead("testGray.png")

imPIL = pil.new("L",(im.getWxSize(),im.getWySize()))

data =mp.ImageToString(im,1,0,mp.colorType.GRAY)

imPIL.fromstring(data)

</code></pre>

bq. *%{color:#006400}+... To Morph-M+%*

<pre><code class="ruby">

imMorp=mp.ImCreate(imPIL.size[0],imPIL.size[1],"UINT8")

data = imPIL.tostring()

mp.ImageFromString(imMorp, data, 1, 0, colorType.GRAY)

</code></pre>

bq. *%{color:#006400}+Morph-M Color images to PIL...+%*

<pre><code class="ruby">

import morphee as mp

import Image as pil

im = mp.fileRead("testRGB.png")

imPIL = pil.new("RGB",(im.getWxSize(),im.getWySize()))

data =mp.ImageToString(im,3,0,mp.colorType.ARGB)

imPIL.fromstring(data)

</code></pre>

h2{color:#8B0000;background:#ddd}. wxPython

bq. *%{color:#006400}+Morph-M Images To WX+%*

<pre><code class="ruby">

import morphee as mp

import wx

im = mp.fileRead("testRGB.png")

imWX = wx.EmptyImage(im.getWxSize(), im.getWySize())

data = mp.ImageToString(im,3,0,mp.colorType.ABGR)

imWX.SetData(data)

</code></pre>

h2{color:#8B0000;background:#ddd}. Numpy(the replacement for Numeric/numarray)

bq. *%{color:#006400}+Morph-M Images To Numpy....+%*

<pre><code class="ruby">

import morphee as mp

import numpy

im = mp.fileRead("testGray.png")

arr = mp.ImageToNumarray(im)

</code></pre>

bq. *%{color:#006400}+... To Morph-M+%*

<pre><code class="ruby">

imMorp=mp.ImCreate(arr.shape[0],arr.shape[1],"UINT8")

im.fromList( map(int,arr.flat) )

</code></pre>

h2{color:#8B0000;background:#ddd}. VTK images

bq. *%{color:#006400}+Morph-M Images To VTK+%*

<pre><code class="ruby">

import morphee as mp

import vtk

im = mp.fileRead("testGray.png")

str = mp.ImageToString(im,1,0,mp.colorType.GRAY)

x=im.getXSize()

y=im.getYSize()

z=im.getZSize()

imimport = vtk.vtkImageImport()

imimport.CopyImportVoidPointer(str,x*y*z)

imimport.SetDataScalarTypeToUnsignedChar()

imimport.SetDataExtent(0,x-1,0,y-1,0,z-1)

imimport.SetWholeExtent(0,x-1,0,y-1,0,z-1)

imdata = imimport.GetOutput()

imdata.Update()

</code></pre>

h2{color:#8B0000;background:#ddd}. Qt4 Image

bq. *%{color:#006400}+Morph-M To QT4: Gray level images+%*

<pre><code class="ruby">

import morphee as mp

from PyQt4 import QtGui

# create/read the image

im = mp.fileRead("testGray.png")

x=im.getXSize()

y=im.getYSize()

sdata=mp.ImageToString(im,1,(4 - x % 4) % 4,mp.colorType.GRAY)

fmt = QtGui.QImage.Format_Indexed8

img = QtGui.QImage(sdata, x, y, fmt)

# make sure the image is displayed in shades of gray

# (and not with a funky LUT)

img.setColorTable([QtGui.qRgb(i,i,i) for i in range(0,256)])

</code></pre>

bq. *%{color:#006400}+Morph-M To QT4: Color images+%*

<pre><code class="ruby">

# create/read the color image

im = mp.fileRead("testRGB.png")

# transfering the data to a qtpixmap

sdata = mp.ImageToString(imLUT,4,0,mp.colorType.ARGB)

x=imLUT.getXSize()

y=imLUT.getYSize()

# convert 32bit buffer to a Qt QImage

fmt = QtGui.QImage.Format_ARGB32

img = QtGui.QImage(sdata, x, y, fmt)

</code></pre>